MicrobIdentifier: A Microbial Identification Software Based on Mass-Spectrometry
نویسندگان
چکیده
منابع مشابه
MicrobIdentifier: A Microbial Identification Software Based on Mass-Spectrometry
As the technology of microbial identification by mass cataloging has been widely used, we have developed the microbial identification software, MicrobIdentifier, which integrates and automates different steps in the procedure of rapid species identification based on mass-spectrometry. This software is written in Java for cross-platform intention.
متن کاملPrimer on agar-based microbial imaging mass spectrometry.
Matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) imaging mass spectrometry (IMS) applied directly to microbes on agar-based medium captures global information about microbial molecules, allowing for direct correlation of chemotypes to phenotypes. This tool was developed to investigate metabolic exchange factors of intraspecies, interspecies, and polymicrobial interactions....
متن کاملMass Spectrometry-Based Bacterial Proteomics: Focus on Dermatologic Microbial Pathogens
The composition of human skin acts as a natural habitat for various bacterial species that function in a commensal and symbiotic fashion. In a healthy individual, bacterial flora serves to protect the host. Under certain conditions such as minor trauma, impaired host immunity, or environmental factors, the risk of developing skin infections is increased. Although a large majority of bacterial a...
متن کاملMass Spectrometry-based PhyloProteomics (MSPP): A novel microbial typing Method
MALDI-TOF-MS of microorganisms, which identifies microbes based on masses of high abundant low molecular weight proteins, is rapidly advancing to become another standard method in clinical routine laboratory diagnostics. Allelic isoforms of these proteins result in varying masses of detectable biomarker ions. These variations give rise to a novel typing method for microorganisms named mass spec...
متن کاملMicrobMatcher: a microbial comparison software based on matrix-assisted laser desorption/ionization with time-of-flight mass spectrometry
Matrix-assisted Laser Desorption/Ionization with Time-of-flight Mass Spectrometry (MALDI-TOFMS) was investigated as a method for the rapid identification of species. Current demand in microbial identification is how to compare unknown strains to the known one quickly, semi-automatically and accurately. In this paper, we present a software tool that allows flexibly microbial matching in a user-f...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Journal of Software Engineering and Applications
سال: 2009
ISSN: 1945-3116,1945-3124
DOI: 10.4236/jsea.2009.23028